plot

! All non-hydrogen atoms
!
    read mol "1hho.pdb";
    transform atom *
      by centre position atom *;
!
! Increase the number of segments to get smoother shading
!
     set segments 14;
     set helixwidth 1.2;
     set atomradius atom C* 2.4;
     set atomradius atom N* 2.4;
     set atomradius atom O* 2.0;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     coil from A2 to A3;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from A3 to A18;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     turn from A18 to A20;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4;

     helix from A20 to A35;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     turn from A35 to A36;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from A36 to A42;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     coil from A42 to A49;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from A49 to A51;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     turn from A51 to A52;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from A52 to A71;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     coil from A71 to A80;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from A80 to A88;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     turn from A88 to A94;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from A94 to A112;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     turn from A112 to A118;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from A118 to A138;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     coil from A138 to A141;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     coil from B1 to B4;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from B4 to B18;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     turn from B18 to B19;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from B19 to B34;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     turn from B34 to B35;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from B35 to B41;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     coil from B41 to B50;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from B50 to B56;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     turn from B56 to B57;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from B57 to B76;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     coil from B76 to B85;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from B85 to B93;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     coil from B93 to B99;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from B99 to B117;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     coil from B117 to B123;

     set planecolour  hsb 0.6 0.7 1.0 ;
     set plane2colour hsb 0.6 0.7 0.7 ;
     set linecolour   hsb 0.6 0.7 0.4 ;

     helix from B123 to B143;

     set planecolour  hsb 0.8 1.0 1.0 ;
     set plane2colour hsb 0.8 1.0 0.7 ;
     set linecolour   hsb 0.8 1.0 0.4 ;

     coil from B143 to B146;

     set atomcolour atom C* hsb 0.666 0.1 1.0;
     set planecolour  hsb 0.666 0.1 1.0 ;
     set plane2colour hsb 0.666 0.1 0.7 ;
     set linecolour   hsb 0.666 0.1 0.4 ;
     ball-and-stick in type HEM;

     set atomcolour atom * hsb 0.55 0.7 1.0;
     cpk in residue B6;
     set atomcolour atom * hsb 0.0 0.9 1.0;
     cpk in residue B11;
     set atomcolour atom * hsb 0.66 0.7 1.0; 
     cpk in residue B20;

end_plot